Software:Protein-DNA Interface Alignment

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Protein-DNA Interface Alignment Software

The protein-DNA interface alignment algorithm is introduced and explained in Siggers et al. (see reference). Here we provide both the linux executables and all source code for programs needed to perform an interface alignment between any two protein-DNA complexes based on their PDB files.



Address Protein-DNA Interface Alignment Software related questions to:
  • honig_software<at>c2b2.columbia.edu



Protein-DNA Interface Alignment Software is supported by a funding from the National Science Foundation Grant # DBI-9904841

Developed in the Honig Lab

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