Software:SURFace Algorithms

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SURFace Algorithms

SURFace algorithms are programs that calculate solvent accessible surface area and curvature corrected solvent accessible surface area. The accessible surface output is calculated for the whole molecule, per residue, and per atom. SURFV calculates solvent accessible area which is defined by a probe as it rolls on the surface of the molecule. Thus use of a zero radius probe will give the Van der Waals surface area. SURFCV calculates solvent accessible area and an average curvature.

• General Description
• Using SURFace Algorithms
• System Requirements
• Download
• References

Address SURFace Algorithms related questions to:

• surface<at>flash62.bioc.columbia.edu

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SURFace Algorithms is supported by a funding from the National Science Foundation Grant # DBI-9904841

Developed in the Honig Lab