All Classes
AbstractAnalysis
AbstractAnalysisLabelComparator
AbstractCluster
AbstractGridAnalysis
AbstractResource
AbstractSaveableParameterPanel
AcceptTypes
AdjacencyMatrix
AdjacencyMatrix.Edge
AdjacencyMatrix.EdgeInfo
AdjacencyMatrix.Node
AdjacencyMatrix.NodeType
AdjacencyMatrixCancelEvent
AdjacencyMatrixDataSet
AdjacencyMatrixFileFormat
Affy3ExpressionAnnotationParser
AffyAnnotationParser
AffyAnnotationUtil
AffyFileFormat
AffyGeneExonStAnnotationParser
AffymetrixParser
AffyParseContext
AffyResource
AlgorithmExecutionResults
Analysis
AnalysisAbortEvent
AnalysisCompleteEvent
AnalysisInvokedEvent
AnalysisParameters
AnnotationInformationManager
AnnotationInformationManager.AnnotationType
AnnotationLookupHelper
AnnotationManager
AnnotationParser
AnnotationsEvent
APSerializable
AracneResult
Asynchronous
BaseException
BaseRuntimeException
BasicAuthenticator
BinaryEncodeDecode
BlastObj
BrowserLauncher
BusySwingWorker
CaArray2Experiment
CaArrayEvent
CaArrayFilteringDialog
CaARRAYPanel
CaArrayQueryEvent
CaArrayRequestEvent
CaArrayRequestHybridizationListEvent
CaArrayReturnHybridizationListEvent
CaArraySuccessEvent
CCMUpdateEvent
CELFileFormat
CellularNetWorkElementInformation
CellularNetworkPreference
CheckThreadViolationRepaintManager
ChoiceField
ClassifierException
ClassSearcher
Closable
Cluster
ClusteringAnalysis
ClusterStatistics
ColorContext
ColorScale
Combinations
CommandBase
CommentsPanel
ComponentClassLoader
ComponentConfigurationManager
ComponentConfigurationManager2
ComponentConfigurationManagerMenu
ComponentConfigurationManagerWindow
ComponentConfigurationManagerWindow2
ComponentMetadata
ComponentObjectInputStream
ComponentRegistry
ComponentResource
CSAffyMarkerValue
CSAlignmentResultSet
CSAncillaryDataSet
CSAnnotationContext
CSAnnotationContextManager
CSAnnotationContextManager.SerializableContexts
CSAnnotPanel
CSAnovaResultSet
CSClassifier
CSDataSet
CSDemandResultSet
CSExpressionMarker
CSExpressionMarkerValue
CSExtendable
CSGeneMarker
CSGenepixMarkerValue
CSGenepixMarkerValue.ComputeSignalMethod
CSGSEAResultDataSet
CSHierClusterDataSet
CSItemList
CSMarkerValue
CSMarkerVector
CSMasterRegulatorResultSet
CSMasterRegulatorTableResultSet
CSMatchedPattern
CSMatchedSeqPattern
CSMatrixReduceExperiment
CSMatrixReduceSet
CSMicroarray
CSMicroarraySet
CSMicroarraySetView
CSPanel
CSPatternMatch
CSPCADataSet
CSPositionSpecificAffinityMatrix
CSProbeIntensityArray
CSProteinStructure
CSPValued
CSSeqCmplxRegistration
CSSeqPatternMatch
CSSeqRegistration
CSSequence
CSSequenceSet
CSSequentialItemList
CSSignificanceResultSet
CSSOMClusterDataSet
CSTTestResultSet
CSUnigene
CsvFileFilter
CSVisualClassifier
DataSetFileFormat
DataSetNode
DataSetSaveNode
DataSetSubNode
DataTypeUtils
DefaultColorContext
DefaultHierCluster
DefaultIconAssignments
DefaultSOMCluster
DependencyManager
Documentation
DoubleField
DownloadClient
DSAffyMarkerValue
DSAlignmentResultSet
DSAncillaryDataSet
DSAnnotated
DSAnnotatedPanel
DSAnnotationContext
DSAnnotationContextManager
DSAnovaResultSet
DSBioObject
DSClassification
DSClusterDataSet
DSDataSet
DSDataSetView
DSDemandResultSet
DSDescribable
DSExtendable
DSGeneMarker
DSGenepixMarkerValue
DSGSEAResultDataSet
DSHierClusterDataSet
DSIdentifiable
DSItemList
DSMarkerValue
DSMasterRagulatorResultSet
DSMasterRegulatorTableResultSet
DSMatchedPattern
DSMatchedSeqPattern
DSMatrixReduceExperiment
DSMatrixReduceSet
DSMicroarray
DSMicroarraySet
DSMicroarraySetView
DSMutableMarkerValue
DSNamed
DSPanel
DSPatternMatch
DSPCADataSet
DSPositionSpecificAffintyMatrix
DSProbeIntensityArray
DSProteinStructure
DSPValue
DSPValued
DSRangeMarker
DSSeqPatternMatch
DSSequence
DSSequenceSet
DSSequential
DSSignificanceResultSet
DSSOMClusterDataSet
DSTTestResultSet
DSUnigene
DynamicMenuItemException
Edge
EdgeList
EdgeListDataSet
EdgeListFileFormat
EdgeListResource
EfficientMicroarraySet
EngineIcons
Event
EventException
ExperimentInformationPanel
ExpressionFileFormat
ExpressionPValueColorContext
ExpressionResource
Field
FileField
FileFormat
FileFormatHelp
FileOpenHandler
FilePathnameUtils
FilteringAnalysis
FilteringAnalysis.CriterionOption
FilteringEvent
FishersExactTest
FoldChangeResult
GeawConfigObject
GeawConfigRule
GeneChromosomeMatcher
GeneOntologyTree
GeneOntologyUtil
GenePixFileFormat
GenepixParseContext
GenePixParser
GenepixResource
GeneSelectorEvent
GeneTaggedEvent
GeoSeriesMatrixParser
GlobalPreferences
GoAnalysisResult
GOTerm
GUIFramework
GUIWindowObject
HierCluster
HierClusterModelEvent
HierClusterModelEventListener
HighlightCurrentParameterThread
HistoryEvent
HistoryPanel
Icons
IdeaGLoc
IdeaModule
IdeaNode
IdeaResultDataSet
IdentifiableImpl
ImageData
ImageNode
ImageSnapshotEvent
ImageSnapshotEvent.Action
InformationPanel
InputFileFormatException
IntegerField
InteractionDetail
JAutoList
JShapeButton
JShapeDialog
KMeansResult
KMeansResultMarkers
LeafSOMCluster
LincsDataSet
LoadDataDialog
LocalDataFilesHelp
MageTabFileFormat
MalformedMenuItemException
MarkerHierCluster
MarkerSelectedEvent
MarkUsResultDataSet
MedusaCommand
MedusaData
MedusaDataSet
menuBarHelp
MenuItemInfo
MenuListener
MicroarrayHierCluster
MicroarraySetParser
MicroarrayViewEventBase
MindyData
MindyDataSet
MindyGeneMarker
MindyResultRow
ModulatorInfo
ModulatorStatistics
Module
NetBoostData
NetBoostDataSet
NonRecursiveClusterSet
Normal
NormalizingAnalysis
NotMenuListenerException
NotVisualPluginException
OboSourceDialog
OboSourcePreference
OboSourcePreference.Source
Overflow
OWFileChooser
PanelVisualProperties
PanelVisualPropertiesManager
ParameterActionListener
ParameterKey
ParameterPanel
ParameterPanelIncludingNormalized
ParamValidationResults
PatFilter
Pathway
PatternDiscoveryParameters
PatternFetchException
PatternFileFormat
PatternLocations
PatternOfflet
PatternOperations
PatternResult
PatternSequenceDisplayUtil
PatternSorter
PatternTableModel
PatternTableView
PDBFileFormat
PendingNodeCancelledEvent
PendingNodeLoadedFromWorkspaceEvent
PendingTreeNode
PhenotypeSelectedEvent
PhenotypeSelectorEvent
PlatformChooser
PluginComponent
PluginDescriptor
PluginObject
PluginRegistry
PluginRule
PredictionModel
Preferences
PreferencesDialog
PreferencesDialog.FileFieldComponent
PreferencesManager
PreferencesMenu
PrintUtils
ProgressBar
ProgressBar.IncrementModel
ProgressBarEvent
ProgressBarT
ProgressBarT.IncrementModel
ProgressChangeEvent
ProgressChangeListener
ProgressDialog
ProgressGraph
ProgressItem
ProgressItem.IncrementModel
ProgressTask
ProjectEvent
ProjectNodeAddedEvent
ProjectNodePostCompletedEvent
ProjectNodeRemovedEvent
ProjectNodeRenamedEvent
ProjectPanel
ProjectSelection
ProjectTreeNode
PropertiesManager
PropertiesMonitor
ProteinAnnotationAnalysis
ProteinDatabaseAnalysis
ProteinSequenceAnalysis
ProteinStructureAnalysis
Publish
PudgeResultSet
QSort
RandomNumberGenerator
Range
RankSorter
RegisterBean
RegPanel
RegularExpressionVerifier
ReHighlightable
RemoteResource
RemoteResourceDialog
RemoteResourceManager
Resource
ResultSetlUtil
RWspHandler
RWspHelper
RWspHelper.AccessRemoteTask
RWspHelper.CheckOpenRemoteTask
RWspHelper.CheckReleaseRemoteTask
RWspHelper.CheckUpdateRemoteTask
RWspHelper.ColorRenderer
RWspHelper.DetailTableModel
RWspHelper.RemoveRemoteTask
RWspHelper.UploadNewTask
RWspHelper.WspTableModel
SampleFileParser
SamResultData
SaveFileFilterFactory
SaveFileFilterFactory.CsvFileFilter
SaveFileFilterFactory.CustomFileFilter
SaveFileFilterFactory.TabDelimitedFileFilter
SaveImage
SaveTree
SelectorResult
SequenceFileFormat
SequenceMarker
SequenceResource
SequenceUtils
SequenceViewWidget
SequenceViewWidgetPanel
ShortCutMenu
SingleMicroarrayEvent
Skin
SkybaseResultSet
SkyLineResultDataSet
SOFTFileFormat
SOFTSeriesParser
SOMCluster
SplashBitmap
StatusBarEvent
StatusChangeListener
SubpanelChangedEvent
Subscribe
SVMResultSet
SwingModel
SynchModel
Synchronous
TabDelimitedDataMatrixFileFormat
TextField
TitrationCurveEvent
TrainingProgressListener
TrainingTask
TreeNodeRenderer
TypeMap
UILauncher
UnAuthenticatedException
UploadClient
Util
ValidationException
ValidationUtils
VisualPlugin
VisualPropertiesDialog
WelcomeScreen
WorkspaceHandler