org.geworkbench.bison.datastructure.bioobjects.structure
Class PudgeResultSet

java.lang.Object
  extended by java.util.AbstractCollection<E>
      extended by java.util.AbstractList<E>
          extended by java.util.ArrayList<T>
              extended by org.geworkbench.bison.datastructure.complex.panels.CSItemList<T>
                  extended by org.geworkbench.bison.datastructure.complex.panels.CSSequentialItemList<T>
                      extended by org.geworkbench.bison.datastructure.biocollections.CSDataSet<T>
                          extended by org.geworkbench.bison.datastructure.biocollections.CSAncillaryDataSet<DSSequence>
                              extended by org.geworkbench.bison.datastructure.bioobjects.structure.PudgeResultSet
All Implemented Interfaces:
java.io.Serializable, java.lang.Cloneable, java.lang.Iterable<DSSequence>, java.util.Collection<DSSequence>, java.util.List<DSSequence>, java.util.RandomAccess, DSAncillaryDataSet<DSSequence>, DSDataSet<DSSequence>, DSItemList<DSSequence>, DSDescribable, DSExtendable, DSIdentifiable, DSNamed

public class PudgeResultSet
extends CSAncillaryDataSet<DSSequence>

Version:
$Id: PudgeResultSet.java 7572 2011-03-12 15:27:59Z zji $
Author:
zji
See Also:
Serialized Form

Field Summary
 
Fields inherited from class org.geworkbench.bison.datastructure.biocollections.CSDataSet
columnOrder, compatibilityLabel, dataSetProperties, description, experimentInfo, extend, file, label
 
Fields inherited from class java.util.AbstractList
modCount
 
Constructor Summary
PudgeResultSet(DSSequenceSet<? extends DSSequence> parent, java.lang.String result)
           
 
Method Summary
 java.io.File getDataSetFile()
           
 DSSequenceSet<DSSequence> getParentDataSet()
          Gets the parent data set for this ancillary data set.
 java.lang.String getResult()
           
 void setDataSetFile(java.io.File file)
           
 void setResult(java.lang.String res)
           
 
Methods inherited from class org.geworkbench.bison.datastructure.biocollections.CSAncillaryDataSet
setParent
 
Methods inherited from class org.geworkbench.bison.datastructure.biocollections.CSDataSet
addNameValuePair, addObject, allowMultipleValues, clearName, forceUniqueValue, getColumnOrder, getCompatibilityLabel, getDataSetName, getDescription, getExperimentInformation, getFile, getID, getLabel, getObject, getValuesForName, isActive, isUniqueValue, setColumnOrder, setDescription, setExperimentInformation, setFile, setID, setLabel, toString, writeToFile
 
Methods inherited from class org.geworkbench.bison.datastructure.complex.panels.CSSequentialItemList
add, add, remove
 
Methods inherited from class org.geworkbench.bison.datastructure.complex.panels.CSItemList
addAll, clear, equals, get, hashCode, set, setLabel
 
Methods inherited from class java.util.ArrayList
addAll, clone, contains, ensureCapacity, get, indexOf, isEmpty, lastIndexOf, remove, removeRange, size, toArray, toArray, trimToSize
 
Methods inherited from class java.util.AbstractList
iterator, listIterator, listIterator, subList
 
Methods inherited from class java.util.AbstractCollection
containsAll, removeAll, retainAll
 
Methods inherited from class java.lang.Object
finalize, getClass, notify, notifyAll, wait, wait, wait
 
Methods inherited from interface org.geworkbench.bison.datastructure.biocollections.DSDataSet
addObject, getColumnOrder, getCompatibilityLabel, getDataSetName, getExperimentInformation, getFile, getObject, isActive, setColumnOrder, setExperimentInformation, setFile, writeToFile
 
Methods inherited from interface org.geworkbench.bison.datastructure.properties.DSDescribable
getDescription, setDescription
 
Methods inherited from interface org.geworkbench.bison.datastructure.properties.DSNamed
getLabel, setLabel
 
Methods inherited from interface org.geworkbench.bison.datastructure.properties.DSExtendable
addNameValuePair, allowMultipleValues, clearName, forceUniqueValue, getValuesForName, isUniqueValue
 
Methods inherited from interface org.geworkbench.bison.datastructure.complex.panels.DSItemList
get
 
Methods inherited from interface java.util.List
add, add, addAll, addAll, clear, contains, containsAll, equals, get, hashCode, indexOf, isEmpty, iterator, lastIndexOf, listIterator, listIterator, remove, remove, removeAll, retainAll, set, size, subList, toArray, toArray
 
Methods inherited from interface org.geworkbench.bison.datastructure.properties.DSIdentifiable
getID, setID
 

Constructor Detail

PudgeResultSet

public PudgeResultSet(DSSequenceSet<? extends DSSequence> parent,
                      java.lang.String result)
Method Detail

getParentDataSet

public DSSequenceSet<DSSequence> getParentDataSet()
Description copied from interface: DSAncillaryDataSet
Gets the parent data set for this ancillary data set.

Specified by:
getParentDataSet in interface DSAncillaryDataSet<DSSequence>
Overrides:
getParentDataSet in class CSAncillaryDataSet<DSSequence>
Returns:

getResult

public java.lang.String getResult()

setResult

public void setResult(java.lang.String res)

getDataSetFile

public java.io.File getDataSetFile()

setDataSetFile

public void setDataSetFile(java.io.File file)