org.geworkbench.bison.datastructure.complex.pattern.matrix
Interface DSMatrixReduceSet

All Superinterfaces:
java.util.Collection<DSPositionSpecificAffintyMatrix>, DSAncillaryDataSet<DSPositionSpecificAffintyMatrix>, DSDataSet<DSPositionSpecificAffintyMatrix>, DSDescribable, DSExtendable, DSIdentifiable, DSItemList<DSPositionSpecificAffintyMatrix>, DSNamed, java.lang.Iterable<DSPositionSpecificAffintyMatrix>, java.util.List<DSPositionSpecificAffintyMatrix>, java.io.Serializable
All Known Implementing Classes:
CSMatrixReduceSet

public interface DSMatrixReduceSet
extends DSAncillaryDataSet<DSPositionSpecificAffintyMatrix>

Version:
$Id: DSMatrixReduceSet.java 7967 2011-06-07 20:41:43Z zji $
Author:
John Watkinson, ch2514

Method Summary
 org.apache.commons.collections15.map.ListOrderedMap<java.lang.String,java.util.List<DSMatrixReduceExperiment>> getMatrixReduceExperiments()
           
 java.lang.String getRunLog()
           
 org.apache.commons.collections15.map.ListOrderedMap<java.lang.String,java.lang.String> getSequences()
           
 void setMatrixReduceExperiments(org.apache.commons.collections15.map.ListOrderedMap<java.lang.String,java.util.List<DSMatrixReduceExperiment>> experiments)
           
 void setRunLog(java.lang.String runlog)
           
 void setSequences(org.apache.commons.collections15.map.ListOrderedMap<java.lang.String,java.lang.String> sequences)
           
 
Methods inherited from interface org.geworkbench.bison.datastructure.biocollections.DSAncillaryDataSet
getParentDataSet
 
Methods inherited from interface org.geworkbench.bison.datastructure.biocollections.DSDataSet
addObject, getColumnOrder, getCompatibilityLabel, getDataSetName, getExperimentInformation, getFile, getObject, isActive, setColumnOrder, setExperimentInformation, setFile, writeToFile
 
Methods inherited from interface org.geworkbench.bison.datastructure.properties.DSDescribable
getDescription, setDescription
 
Methods inherited from interface org.geworkbench.bison.datastructure.properties.DSNamed
getLabel, setLabel
 
Methods inherited from interface org.geworkbench.bison.datastructure.properties.DSExtendable
addNameValuePair, allowMultipleValues, clearName, forceUniqueValue, getValuesForName, isUniqueValue
 
Methods inherited from interface org.geworkbench.bison.datastructure.complex.panels.DSItemList
get
 
Methods inherited from interface java.util.List
add, add, addAll, addAll, clear, contains, containsAll, equals, get, hashCode, indexOf, isEmpty, iterator, lastIndexOf, listIterator, listIterator, remove, remove, removeAll, retainAll, set, size, subList, toArray, toArray
 
Methods inherited from interface org.geworkbench.bison.datastructure.properties.DSIdentifiable
getID, setID
 

Method Detail

getSequences

org.apache.commons.collections15.map.ListOrderedMap<java.lang.String,java.lang.String> getSequences()

getMatrixReduceExperiments

org.apache.commons.collections15.map.ListOrderedMap<java.lang.String,java.util.List<DSMatrixReduceExperiment>> getMatrixReduceExperiments()

setSequences

void setSequences(org.apache.commons.collections15.map.ListOrderedMap<java.lang.String,java.lang.String> sequences)

setMatrixReduceExperiments

void setMatrixReduceExperiments(org.apache.commons.collections15.map.ListOrderedMap<java.lang.String,java.util.List<DSMatrixReduceExperiment>> experiments)

setRunLog

void setRunLog(java.lang.String runlog)

getRunLog

java.lang.String getRunLog()