org.geworkbench.util.associationdiscovery.statistics
Class KProbabilityDensity

java.lang.Object
  org.geworkbench.util.associationdiscovery.statistics.KProbabilityDensity

public class KProbabilityDensity
extends java.lang.Object

Title: Plug And Play

Description: Dynamic Proxy Implementation of enGenious

Copyright: Copyright (c) 2002

Company: First Genetic Trust Inc.

Version:

1.0

Author:

Manjunath Kustagi

Field Summary

boolean[]	identical
int	identNo
java.util.HashMap[]	markerP
int[]	markerPNo

Constructor Summary

KProbabilityDensity(int _geneNo, int _mArrayNo)

Method Summary

int	getBin(int k, double p)
int	getBinNo()
double	getBinSize(int k, int bin)
int	getIdentNo()
double	getLogQj(int j)
double	getP(int k, int bin)
double[]	getPDensity(int k)
double	getPDensity(int k, double p)
double	getPDensity(int k, int bin)
void	histogram(double p)
void	initialize(int _K)
void	print()
void	printHistogram()
void	reset(int _geneNo, int _mArrayNo)
void	resetHistogram()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

markerP

public java.util.HashMap[] markerP

markerPNo

public int[] markerPNo

identical

public boolean[] identical

identNo

public int identNo

Constructor Detail

KProbabilityDensity

public KProbabilityDensity(int _geneNo,
                           int _mArrayNo)

Method Detail

reset

public void reset(int _geneNo,
                  int _mArrayNo)

getP

public double getP(int k,
                   int bin)

getBinSize

public double getBinSize(int k,
                         int bin)

getBin

public int getBin(int k,
                  double p)

initialize

public void initialize(int _K)

getPDensity

public double getPDensity(int k,
                          double p)

getPDensity

public double getPDensity(int k,
                          int bin)

getPDensity

public double[] getPDensity(int k)

resetHistogram

public void resetHistogram()

histogram

public void histogram(double p)

printHistogram

public void printHistogram()

print

public void print()

getLogQj

public double getLogQj(int j)

getIdentNo

public int getIdentNo()

getBinNo

public int getBinNo()