org.geworkbench.util.associationdiscovery.statistics
Class KProbabilityDensity

java.lang.Object
  extended by org.geworkbench.util.associationdiscovery.statistics.KProbabilityDensity

public class KProbabilityDensity
extends java.lang.Object

Title: Plug And Play

Description: Dynamic Proxy Implementation of enGenious

Copyright: Copyright (c) 2002

Company: First Genetic Trust Inc.

Version:
1.0
Author:
Manjunath Kustagi

Field Summary
 boolean[] identical
           
 int identNo
           
 java.util.HashMap[] markerP
           
 int[] markerPNo
           
 
Constructor Summary
KProbabilityDensity(int _geneNo, int _mArrayNo)
           
 
Method Summary
 int getBin(int k, double p)
           
 int getBinNo()
           
 double getBinSize(int k, int bin)
           
 int getIdentNo()
           
 double getLogQj(int j)
           
 double getP(int k, int bin)
           
 double[] getPDensity(int k)
           
 double getPDensity(int k, double p)
           
 double getPDensity(int k, int bin)
           
 void histogram(double p)
           
 void initialize(int _K)
           
 void print()
           
 void printHistogram()
           
 void reset(int _geneNo, int _mArrayNo)
           
 void resetHistogram()
           
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Field Detail

markerP

public java.util.HashMap[] markerP

markerPNo

public int[] markerPNo

identical

public boolean[] identical

identNo

public int identNo
Constructor Detail

KProbabilityDensity

public KProbabilityDensity(int _geneNo,
                           int _mArrayNo)
Method Detail

reset

public void reset(int _geneNo,
                  int _mArrayNo)

getP

public double getP(int k,
                   int bin)

getBinSize

public double getBinSize(int k,
                         int bin)

getBin

public int getBin(int k,
                  double p)

initialize

public void initialize(int _K)

getPDensity

public double getPDensity(int k,
                          double p)

getPDensity

public double getPDensity(int k,
                          int bin)

getPDensity

public double[] getPDensity(int k)

resetHistogram

public void resetHistogram()

histogram

public void histogram(double p)

printHistogram

public void printHistogram()

print

public void print()

getLogQj

public double getLogQj(int j)

getIdentNo

public int getIdentNo()

getBinNo

public int getBinNo()