org.geworkbench.util.pathwaydecoder.mutualinformation
Class EdgeListDataSet

java.lang.Object
  extended by java.util.AbstractCollection<E>
      extended by java.util.AbstractList<E>
          extended by java.util.ArrayList<T>
              extended by org.geworkbench.bison.datastructure.complex.panels.CSItemList<T>
                  extended by org.geworkbench.bison.datastructure.complex.panels.CSSequentialItemList<T>
                      extended by org.geworkbench.bison.datastructure.biocollections.CSDataSet<T>
                          extended by org.geworkbench.bison.datastructure.biocollections.CSAncillaryDataSet<DSBioObject>
                              extended by org.geworkbench.util.pathwaydecoder.mutualinformation.EdgeListDataSet
All Implemented Interfaces:
java.io.Serializable, java.lang.Cloneable, java.lang.Iterable<DSBioObject>, java.util.Collection<DSBioObject>, java.util.List<DSBioObject>, java.util.RandomAccess, DSAncillaryDataSet<DSBioObject>, DSDataSet<DSBioObject>, DSItemList<DSBioObject>, DSDescribable, DSExtendable, DSIdentifiable, DSNamed

public class EdgeListDataSet
extends CSAncillaryDataSet<DSBioObject>

See Also:
Serialized Form

Field Summary
 
Fields inherited from class org.geworkbench.bison.datastructure.biocollections.CSDataSet
columnOrder, compatibilityLabel, dataSetProperties, description, experimentInfo, extend, file, label
 
Fields inherited from class java.util.AbstractList
modCount
 
Constructor Summary
EdgeListDataSet(java.lang.String label, EdgeList data, java.lang.String filename)
           
 
Method Summary
 EdgeList getData()
           
 java.lang.String getFilename()
           
 void setData(EdgeList data)
           
 void setFilename(java.lang.String filename)
           
 void writeToFile(java.lang.String fileName)
          Writes the data set to the provided filename.
 
Methods inherited from class org.geworkbench.bison.datastructure.biocollections.CSAncillaryDataSet
getParentDataSet, setParent
 
Methods inherited from class org.geworkbench.bison.datastructure.biocollections.CSDataSet
addNameValuePair, addObject, allowMultipleValues, clearName, forceUniqueValue, getColumnOrder, getCompatibilityLabel, getDataSetName, getDescription, getExperimentInformation, getFile, getID, getLabel, getObject, getValuesForName, isActive, isUniqueValue, setColumnOrder, setDescription, setExperimentInformation, setFile, setID, setLabel, toString
 
Methods inherited from class org.geworkbench.bison.datastructure.complex.panels.CSSequentialItemList
add, add, remove
 
Methods inherited from class org.geworkbench.bison.datastructure.complex.panels.CSItemList
addAll, clear, equals, get, hashCode, set, setLabel
 
Methods inherited from class java.util.ArrayList
addAll, clone, contains, ensureCapacity, get, indexOf, isEmpty, lastIndexOf, remove, removeRange, size, toArray, toArray, trimToSize
 
Methods inherited from class java.util.AbstractList
iterator, listIterator, listIterator, subList
 
Methods inherited from class java.util.AbstractCollection
containsAll, removeAll, retainAll
 
Methods inherited from class java.lang.Object
finalize, getClass, notify, notifyAll, wait, wait, wait
 
Methods inherited from interface org.geworkbench.bison.datastructure.biocollections.DSDataSet
addObject, getColumnOrder, getCompatibilityLabel, getDataSetName, getExperimentInformation, getFile, getObject, isActive, setColumnOrder, setExperimentInformation, setFile
 
Methods inherited from interface org.geworkbench.bison.datastructure.properties.DSDescribable
getDescription, setDescription
 
Methods inherited from interface org.geworkbench.bison.datastructure.properties.DSNamed
getLabel, setLabel
 
Methods inherited from interface org.geworkbench.bison.datastructure.properties.DSExtendable
addNameValuePair, allowMultipleValues, clearName, forceUniqueValue, getValuesForName, isUniqueValue
 
Methods inherited from interface org.geworkbench.bison.datastructure.complex.panels.DSItemList
get
 
Methods inherited from interface java.util.List
add, add, addAll, addAll, clear, contains, containsAll, equals, get, hashCode, indexOf, isEmpty, iterator, lastIndexOf, listIterator, listIterator, remove, remove, removeAll, retainAll, set, size, subList, toArray, toArray
 
Methods inherited from interface org.geworkbench.bison.datastructure.properties.DSIdentifiable
getID, setID
 

Constructor Detail

EdgeListDataSet

public EdgeListDataSet(java.lang.String label,
                       EdgeList data,
                       java.lang.String filename)
Method Detail

getData

public EdgeList getData()

setData

public void setData(EdgeList data)

getFilename

public java.lang.String getFilename()

setFilename

public void setFilename(java.lang.String filename)

writeToFile

public void writeToFile(java.lang.String fileName)
Description copied from interface: DSDataSet
Writes the data set to the provided filename.

Specified by:
writeToFile in interface DSDataSet<DSBioObject>
Overrides:
writeToFile in class CSDataSet<DSBioObject>
Parameters:
fileName - the filename (path) to which to write this file.