GenSpace
From Informatics
(Difference between revisions)
(Added the List of Features to be added to genspace) |
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| - | + | * '''Features''' | |
| + | ** '''Description''' | ||
| + | *** '''Use Cases/Things to do''' | ||
| + | |||
| + | * Transactions/pipelines | ||
| + | ** Treat various analysis run as a pipeline | ||
| + | *** People using the same tools in a pipeline | ||
| + | *** Find other sessions which involve same analysis | ||
| + | * Ontology | ||
| + | ** Use domain knowledge (through config files of ontology) to group tools | ||
| + | *** Data mining using rollups for other use cases (e.g. suggest a user to use "network clustering" tool rather than tool A) | ||
| + | *** Show window to user showing hierarchy of tools in the ontology | ||
| + | * Login/Privacy | ||
| + | ** Improve the whole login procedure | ||
| + | *** Authenticate against central server | ||
| + | *** Ask user for preferences for either "log, log anonymously, dont log" | ||
| + | * Miscellaneous | ||
| + | ** Miscellaneous features to be added to genspace | ||
| + | *** Users can rate tools | ||
| + | *** Users can see their own past history | ||
| + | *** Users can see experts for different filetypes (fasta, exp, etc.) | ||
| + | * Online Help | ||
| + | ** Provide documentation for usage and help through geworkbench | ||
| + | * Groups | ||
| + | ** Use manually and automatically created groups to group users into various different "social networks" | ||
| + | *** Work on the whole concept of groups | ||
| + | *** People can join groups either manually or automatically | ||
| + | *** Allow all "assisted decisions" per group basis (like the most popular tool in the group, expert in group, etc.) | ||
| + | * Workspace/File Sharing | ||
| + | ** This can be used by users to share their files and workspaces with other users | ||
| + | *** Need to investigate more in detail especially with respect to to security/privacy issues | ||
| + | * Statistics | ||
| + | ** Provide detailed statistics on geworkbench usage | ||
| + | *** Admin Section and (maybe) users can see what tools are used the most in a group, overall, etc. | ||
| + | * User Logout | ||
| + | ** Notify the genspace server when a user logs out of geworkbench | ||
| + | *** Either Kiran adds a hook to geworkbench or we use a "heartbeat" mechanism | ||
Revision as of 22:19, 28 February 2008
- Features
- Description
- Use Cases/Things to do
- Description
- Transactions/pipelines
- Treat various analysis run as a pipeline
- People using the same tools in a pipeline
- Find other sessions which involve same analysis
- Treat various analysis run as a pipeline
- Ontology
- Use domain knowledge (through config files of ontology) to group tools
- Data mining using rollups for other use cases (e.g. suggest a user to use "network clustering" tool rather than tool A)
- Show window to user showing hierarchy of tools in the ontology
- Use domain knowledge (through config files of ontology) to group tools
- Login/Privacy
- Improve the whole login procedure
- Authenticate against central server
- Ask user for preferences for either "log, log anonymously, dont log"
- Improve the whole login procedure
- Miscellaneous
- Miscellaneous features to be added to genspace
- Users can rate tools
- Users can see their own past history
- Users can see experts for different filetypes (fasta, exp, etc.)
- Miscellaneous features to be added to genspace
- Online Help
- Provide documentation for usage and help through geworkbench
- Groups
- Use manually and automatically created groups to group users into various different "social networks"
- Work on the whole concept of groups
- People can join groups either manually or automatically
- Allow all "assisted decisions" per group basis (like the most popular tool in the group, expert in group, etc.)
- Use manually and automatically created groups to group users into various different "social networks"
- Workspace/File Sharing
- This can be used by users to share their files and workspaces with other users
- Need to investigate more in detail especially with respect to to security/privacy issues
- This can be used by users to share their files and workspaces with other users
- Statistics
- Provide detailed statistics on geworkbench usage
- Admin Section and (maybe) users can see what tools are used the most in a group, overall, etc.
- Provide detailed statistics on geworkbench usage
- User Logout
- Notify the genspace server when a user logs out of geworkbench
- Either Kiran adds a hook to geworkbench or we use a "heartbeat" mechanism
- Notify the genspace server when a user logs out of geworkbench
