List of System tests
From Informatics
List of system tests and status of implementation
The list is still in the making. This list is outdated. Please refer to Excel spreadsheet for up-to-date information. The very latest can be found by asking Bernd (baj2107). Otherwise check sharepoint for a reasonably up-to-date version.
| System Test | Comments from Test manager | Test data file names | Date of review | Reviewer comment |
|---|---|---|---|---|
| 2 Channel genepix filter V2.0.doc link | OK | Genepix_sample.gpr | ||
| Affy filter V2.0.doc | OK | filter data2.exp | 11.01.06 | Ok |
| Microarray centering normalizer V2.0.doc | OK | webmatrix-quantile.exp | ||
| Dataset annotations V2.0.doc | OK | |||
| blast V2.0.doc |
| |||
| OK | ||||
| Deviation filter V2.0.doc | OK | |||
| OK | ||||
| Gene Ontology V2.0.doc | OK |
bjmatrix.exp er-list.csv</TD> | ||
| OK | ||||
| OK | ||||
| There is still a problem with the missing values filter. see bug 1135 | ||||
| OK | ||||
| OK | ||||
| OK | ||||
| Microarray viewer V2.0.doc | OK | |||
| OK | ||||
| pattern discovery V2.0.doc |
| |||
| Promoter Panel V2.0.doc | Some parameters not checked: Add TF, Retreive, 13K option | |||
| sequence Panel V2.0.doc | OK | |||
| quantile normalizer V2.0.doc | OK | |||
| OK, Problem with reference line! known issue | ||||
| OK | ||||
| OK | ||||
| tabular microarray viewer V2.0.doc | OK | |||
| reverse engineering V2.0.doc | still in development need some bugs fixed to proceed | |||
| PDB, and RMA express tested here. still in development, netboost edge list is missing, the rest is tested elsewhere | files | |||
| Marker annotations/ caBioPathways | OK | test data | ||
| Aracne | OK | |||
| Experiment Information | Not sure what to do here | |||
| Project panel | Not sure what to do here | |||
| CEL image viewer / Cel file loader | Not done yet | |||
| Jmol | Not done yet | |||
| Expression Value Distribution | Not done yet | |||
| Expression Profiles | Not done yet | |||
| Network bowser | Not done yet | |||
| Reverse Engineering | Not done yet | |||
| Sequence Retriever | Not done yet | |||
| Version information | Not done yet | |||
| Preferences | OK | |||
| PDB structure format | OK, done in file formats | |||
| session mgr | Not done yet | |||
| Matrix Reduce | A new use case is being written | |||
| Synteny | Not yet done |
