Difference between revisions of "Components"
| Line 23: | Line 23: | ||
* caScript (Not yet complete) | * caScript (Not yet complete) | ||
* Synteny parameters (Does not generate proper dataset subnodes) | * Synteny parameters (Does not generate proper dataset subnodes) | ||
| + | * Marker Annotations ("Retrieve Annotations" button should be disabled until user makes marker selection) | ||
| + | * Color Mosaic ("Pat" and "Abs" buttons appear to do nothing) | ||
| + | * Expression Profiles (Performs large computations without user request) | ||
Revision as of 16:14, 2 January 2006
Contents
geWorkBench Component List and Status
Core Components (bundled with main application)
Major Components
- Analysis (Hierarchical Clustering, SOM, T-Test, Multi T-Test)
- Filtering (Deviation, Affy detection call, Expression threshold, Genepix Flags, Missing values, 2 channel)
- Normalization (Housekeeping, Log2 transform, Marker based centering, Mean variance, Array based centering, Missing value, Threshold, Quantile)
Minor Components
- Dataset Annotation
- Dataset history
- Experiment info
Additional Components (that pass the Plugin certification checklist)
Components that do not yet pass the Plugin certification checklist
- Associations (Interface needs to be standardized)
- caScript (Not yet complete)
- Synteny parameters (Does not generate proper dataset subnodes)
- Marker Annotations ("Retrieve Annotations" button should be disabled until user makes marker selection)
- Color Mosaic ("Pat" and "Abs" buttons appear to do nothing)
- Expression Profiles (Performs large computations without user request)
