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− | == Feature requests for geWorkbench ==
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− | === Menu ===
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− | ----
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− | ==== File ====
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− | ==== Edit ====
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− | ==== View ====
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− | ==== Commands ====
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− | ==== Tools ====
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− | ==== Help ====
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− | ----
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− | === Project Folders ===
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− | === Markers ===
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− | ----
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− | === Arrays/Phenotypes ===
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− | ----
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− | === Sets ===
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− | ----
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− | ----
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− | === FASTA sequences ===
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− | ==== Promoter ====
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− | ----
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− | ==== Sequence Panel ====
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− | ----
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− | ==== Position Histogram ====
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− | ----
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− | ==== Simulation ====
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− | ----
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− | ===== Network Generator =====
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− | ----
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− | ===== Phenotype & Optimizer Options =====
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− | ----
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− | ===== Interactions Display =====
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− | ----
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− | ==== 5. Sequence alignment ====
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− | ----
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− | ===== BLAST =====
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− | ----
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− | ===== HMM =====
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− | ----
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− | ===== Other =====
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− | ----
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− | ==== Pattern discovery ====
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− | ----
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− | ==== Associations ====
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− | ----
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− | ==== caScript ====
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− | ----
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− | ==== Dataset annotations ====
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− | ----
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− | ==== data history ====
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− | ==== Experiment Info ====
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− | ----
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− | === Microarray data ===
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− | ==== Simulation ====
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− | ----
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− | ==== Network browser ====
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− | ----
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− | ==== Interactions ====
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− | ----
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− | ==== Aracne ====
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− | ==== Tabular Microarray Viewer ====
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− | ==== Sequence Retriever ====
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− | ----
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− | ==== Synteny ====
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− | ----
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− | ==== Microarray viewer ====
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− | ==== Gene Ontology ====
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− | ==== GSEA ====
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− | ==== Reverser Engineering ====
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− | ==== Scatter Plot ====
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− | ==== caBIO pathways ====
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− | ==== Marker Annotations ====
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− | ==== Color Mosaic Expression Profiles ====
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− | ==== Expression Value Distribution ====
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− | ----
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− | ==== Experiment Info ====
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− | ----
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− | ==== Synteny Parameters ====
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− | ----
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− | ===== Program =====
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− | ----
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− | ====== MUMmer ======
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− | ====== Dots ======
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− | ====== Synteny map ======
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− | ----
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− | ===== Genome selections =====
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− | ===== Annotations =====
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− | ==== Normalization ====
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− | ===== Housekeeping Genes Normalizer =====
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− | ===== Log2 Transformation =====
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− | ===== Marker-based centering =====
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− | ===== Mean-variance normalizer =====
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− | ===== Array-based centering =====
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− | ===== Missing value computations =====
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− | ===== Threshold Normalizer =====
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− | ===== Quantile Normalization =====
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− | ==== T-Profiler ====
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− | ==== Analysis ====
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− | ----
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− | ===== Fast Hierarchical clustering =====
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− | ----
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− | ===== Matrix reduce =====
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− | ----
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− | ===== Svm classifier =====
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− | ----
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− | ===== Slmr classifier =====
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− | ----
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− | ===== SOM =====
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− | ----
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− | ===== T-test =====
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− | ----
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− | ===== Multi T-test =====
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− | ----
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− | ==== Associations ====
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− | ----
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− | ==== caScript ====
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− | ----
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− | ==== Dataset Annotations ====
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− | ----
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− | ==== Filtering ====
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− | ----
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− | ===== Deviation filter =====
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− | ----
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− | ===== Affy detection call filter =====
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− | ----
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− | ===== Expression threshold filter =====
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− | ----
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− | ===== Genepix flags filter =====
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− | ----
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− | ===== Missing value filter =====
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− | ----
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− | ===== 2 channel threshold filter =====
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− | ----
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− | ==== Dataset History ====
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− | ----
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