Difference between revisions of "User:Rfriedman"
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files in the following GCG formats: sequence, mutiple sequence, and rsf. | files in the following GCG formats: sequence, mutiple sequence, and rsf. | ||
| − | ( | + | (3/23/06) A more robust couterpart of k-means clustering with statistical |
estimates for micorarray analysis is described in the following papers: | estimates for micorarray analysis is described in the following papers: | ||
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http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12184810&query_hl=11&itool=pubmed_docsum | http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12184810&query_hl=11&itool=pubmed_docsum | ||
| − | + | 3/30/06 I don't like the slider to change arrays in the microarray widow. The identity of an array is a fixed, not a variable quantity. I suggest that a pull-down window for this | |
would be better. | would be better. | ||
| + | |||
| + | 4/7/06 I suggest asking "are you sure" when a user asks to remove a project. | ||
==Tutorials Comments== | ==Tutorials Comments== | ||
Revision as of 12:37, 7 April 2006
Functionality Comments
Rich, add functionality comments and new feature suggestions here.
One quick inital suggestion. geWorkbench should be able to import files in the following GCG formats: sequence, mutiple sequence, and rsf.
(3/23/06) A more robust couterpart of k-means clustering with statistical estimates for micorarray analysis is described in the following papers:
3/30/06 I don't like the slider to change arrays in the microarray widow. The identity of an array is a fixed, not a variable quantity. I suggest that a pull-down window for this would be better.
4/7/06 I suggest asking "are you sure" when a user asks to remove a project.
Tutorials Comments
Tutorials comments go here.
The initial download should come with all of the datasets in the tutorial (the cardio set was missing when I installed) OR the tutorial should show where these can be downloaded.
3/30/06: Some mention of what the micorarray viewer does should be included in the manual - i.e that it shows a raw image of the chip.
3/30/06: What it means to merge microarray files should be stated more explicitly.
4/07/06 That the chip recognition message is only shown once should be stated. Alternatively maybe it should be shown each time - but not require an okay button.
