Difference between revisions of "BISON"
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The foundation for component interoperability in geWorkbench is 'BISON'' ('''B'''iomedical '''I'''nformatics '''S'''tructured '''ON'''tology), an application-wide data-model for the representation of bioinformatics objects, including both primary data and analysis results. geWorkbench components communicate by exchanging BISON objects, via an underlying event-driven framework. | The foundation for component interoperability in geWorkbench is 'BISON'' ('''B'''iomedical '''I'''nformatics '''S'''tructured '''ON'''tology), an application-wide data-model for the representation of bioinformatics objects, including both primary data and analysis results. geWorkbench components communicate by exchanging BISON objects, via an underlying event-driven framework. | ||
| − | BISON borrows concepts from a number of | + | BISON borrows concepts from a number of well established domain models, such as [http://www.mged.org/Workgroups/MAGE/mage-om.html MAGE-OM], [http://biojava.org/ BioJava], and [http://www.biopax.org/ BioPax]. Its design strives to achieve the right balance between concrete needs and model expressiveness, to avoid creating a model too complicated to be of practically utility. |
For additional information on BISON, please see the following resources: | For additional information on BISON, please see the following resources: | ||
* [{{SERVER}}/workbench/api/index.html BISON Javadocs documentation]. | * [{{SERVER}}/workbench/api/index.html BISON Javadocs documentation]. | ||
Latest revision as of 00:13, 9 July 2013
The foundation for component interoperability in geWorkbench is 'BISON (Biomedical Informatics Structured ONtology), an application-wide data-model for the representation of bioinformatics objects, including both primary data and analysis results. geWorkbench components communicate by exchanging BISON objects, via an underlying event-driven framework.
BISON borrows concepts from a number of well established domain models, such as MAGE-OM, BioJava, and BioPax. Its design strives to achieve the right balance between concrete needs and model expressiveness, to avoid creating a model too complicated to be of practically utility.
For additional information on BISON, please see the following resources:
