Difference between revisions of "Talk:Home"

(Microarray data)
('''Microarray data''')
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=== '''Microarray data''' ===  
 
=== '''Microarray data''' ===  
 +
The following panels/functionalities are requested specifically for Microarray data:
 +
* ANOVA
 
==== Simulation ====  
 
==== Simulation ====  
 
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Revision as of 14:07, 19 September 2006

Contents

Feature requests for geWorkbench

Menu


File


Edit


View


Commands


Tools


Help



Project Folders



Markers



Arrays/Phenotypes



Sets



FASTA sequences

Promoter


Sequence Panel


Position Histogram


Simulation


Network Generator

Phenotype & Optimizer Options

Interactions Display

5. Sequence alignment


BLAST

HMM

Other

Pattern discovery


Associations


caScript


Dataset annotations


data history


Experiment Info



Microarray data

The following panels/functionalities are requested specifically for Microarray data:

  • ANOVA

Simulation


Network browser


Interactions


Aracne


Tabular Microarray Viewer


Sequence Retriever


Synteny


Microarray viewer


Gene Ontology


GSEA


Reverser Engineering


Scatter Plot


caBIO pathways


Marker Annotations


Color Mosaic Expression Profiles


Expression Value Distribution


Experiment Info


Synteny Parameters


Program

MUMmer

Dots

Synteny map

Genome selections

Annotations

Normalization


Housekeeping Genes Normalizer

Log2 Transformation

Marker-based centering

Mean-variance normalizer

Array-based centering

Missing value computations

Threshold Normalizer

Quantile Normalization

T-Profiler


Analysis


Fast Hierarchical clustering

Matrix reduce

Svm classifier

Slmr classifier

SOM

T-test

Multi T-test

Associations


caScript


Dataset Annotations


Filtering


Deviation filter

Affy detection call filter

Expression threshold filter

Genepix flags filter

Missing value filter

2 channel threshold filter

Dataset History