Test file collection
|
test file collection | Comments on geWorkbench | SAEC notes | SAEC protocol | SAEC executive summary | Other |
Contents
The following is a list of test data with a short description on where to find the data and why it is here
Test files for accuracy determination
Files can be found at \\genome8\Public\baj2107\TestData\accuracy
| file type | file name | description |
|---|---|---|
| Netboost EdgeList | ||
| MAS5/GCOS | ||
| RMA/TAB delimited | ||
| .CEL | ||
| PDB | ||
| GenePix | ||
| FASTA |
Test files for performance evaluation
files can be found at \\genome8\Public\baj2107\TestData\performance
| file type | file name | description |
|---|---|---|
| Netboost EdgeList | ||
| MAS5/GCOS | ||
| RMA/TAB delimited | GSE1133-HS_133A.tab-del.txt | GEO data GSE1133. ~158 arrays, ~22,000 markers |
| .CEL | ||
| PDB | ||
| GenePix | ||
| FASTA |
Files with errors in the file format
files can be found at \\genome8\Public\baj2107\TestData\bad_format
| file type | file name | description |
|---|---|---|
| Netboost EdgeList | ||
| MAS5/GCOS | ||
| RMA/TAB delimited | ||
| .CEL | ||
| PDB | ||
| GenePix | ||
| FASTA |
extreme cases with high/low values
files can be found at \\genome8\Public\baj2107\TestData\boundary_cases
| file type | file name | description |
|---|---|---|
| Netboost EdgeList | ||
| MAS5/GCOS | ||
| RMA/TAB delimited | ||
| .CEL | ||
| PDB | ||
| GenePix | ||
| FASTA |
