Difference between revisions of "Home"

 
(28 intermediate revisions by 3 users not shown)
Line 1: Line 1:
<br/>
 
 
__NOTOC__
 
__NOTOC__
 
+
<!--
<sgallery width="680" showinfopane="false" timed="true" delay="4000" showcarousel="false">
+
<sgallery width="700" showinfopane="false" timed="true" delay="4000" showcarousel="false">
 
ARACNe_with_t-test_home_gallery.PNG
 
ARACNe_with_t-test_home_gallery.PNG
BLAST_home_gallery.PNG
+
MarkUs_home_gallery.PNG
CCM_home_gallery.PNG
 
 
Dendrogram_home_gallery.PNG
 
Dendrogram_home_gallery.PNG
Gene_Ontology_home_gallery.PNG
+
Volcano_plot_home_gallery.PNG
 
JMol_viewer_home_gallery.PNG
 
JMol_viewer_home_gallery.PNG
 
Skybase_home_gallery.PNG
 
Skybase_home_gallery.PNG
 
TF_binding_site_prediction_home_gallery.PNG
 
TF_binding_site_prediction_home_gallery.PNG
Volcano_plot_home_gallery.PNG
 
 
Motif_discovery_home_gallery.PNG
 
Motif_discovery_home_gallery.PNG
 +
BLAST_home_gallery.PNG
 +
CCM_home_gallery.PNG
 +
Gene_Ontology_home_gallery.PNG
 
</sgallery>
 
</sgallery>
 +
-->
 +
 +
[[Image:geworkbench_banner.png]]
  
{|  class="wikitable" style="background-color:#F8EDD6;" cellpadding="10"
+
{|  class="wikitable" style="background-color:#F8EDD6;" cellpadding="10" width="700px"
 
|colspan="2"|
 
|colspan="2"|
 
<h2>Overview</h2>
 
<h2>Overview</h2>
Line 24: Line 27:
 
* validating computational hypothesis through the integration of gene and pathway annotation information from curated sources as well as through Gene Ontology enrichment analysis.
 
* validating computational hypothesis through the integration of gene and pathway annotation information from curated sources as well as through Gene Ontology enrichment analysis.
 
<br/>
 
<br/>
geWorkbench is the Bioinformatics platform of [http://magnet.c2b2.columbia.edu MAGNet], the '''National Center for the Multi-scale Analysis of Genomic and Cellular Networks''' (one of the [http://www.ncbcs.org 7 National Centers for Biomedial Computing] funded through the [http://nihroadmap.nih.gov/ NIH Roadmap]). Additionally, geWorkbench is supported by [https://cabig.nci.nih.gov/ caBIG<sup>&reg;</sup>, NCI's cancer Biomedical Informatics Grid initiative].
+
geWorkbench is the Bioinformatics platform of [http://magnet.c2b2.columbia.edu MAGNet], the '''National Center for the Multi-scale Analysis of Genomic and Cellular Networks''' (one of the [http://www.ncbcs.org 7 National Centers for Biomedial Computing] funded through the [http://nihroadmap.nih.gov/ NIH Common Fund]).  
 +
<!--
 +
In the past, geWorkbench has received support from [https://cabig.nci.nih.gov/ caBIG<sup>&reg;</sup>, NCI's cancer Biomedical Informatics Grid initiative].
  
 
<br/>
 
<br/>
 
End-user and developer support for geWorkbench is provided through the caBIG<sup>&reg;</sup> [https://cabig-kc.nci.nih.gov/Molecular/KC/index.php/Main_Page Molecular Analysis Tools Knowledge Center], a component of the caBIG<sup>&reg;</sup> [https://cabig.nci.nih.gov/esn/ Enterprise Support Network].
 
End-user and developer support for geWorkbench is provided through the caBIG<sup>&reg;</sup> [https://cabig-kc.nci.nih.gov/Molecular/KC/index.php/Main_Page Molecular Analysis Tools Knowledge Center], a component of the caBIG<sup>&reg;</sup> [https://cabig.nci.nih.gov/esn/ Enterprise Support Network].
 +
-->
 
</toggledisplay>
 
</toggledisplay>
 
|-
 
|-
 
| style="width: 50%; background-color: #F2F8C7;"|
 
| style="width: 50%; background-color: #F2F8C7;"|
 
<h2>Quick Start</h2>
 
<h2>Quick Start</h2>
Please see the [[QuickStart| '''Quick Start''']] guide to geWorkbench to see how to get started using geWorkbench right away.  
+
Please see the [[QuickStart| Quick Start]] guide to geWorkbench to see how to get started using geWorkbench right away.  
 
| style="width: 50%; background-color: #C7F8CB;"|
 
| style="width: 50%; background-color: #C7F8CB;"|
 
<h2>Current Release</h2>
 
<h2>Current Release</h2>
The latest production release of geWorkbenc (v2.4.1) was released October 26th, 2012.
+
The latest production version of geWorkbench (v2.6.0.3) was released on December 21, 2016.
* [[Previous_Releases#Brief_overview_of_changes_in_geWorkbench_release_2.4.1|See changes included in latest release]].
+
* [[Release_Descriptions#Brief_overview_of_changes_in_geWorkbench_release_2.6.0|See changes included in latest release]].
* [[Previous_Releases|See history of past releases]].
+
* [[Release_Descriptions|See history of past releases]].
 
* [[Download_and_Installation|Download geWorkbench]].
 
* [[Download_and_Installation|Download geWorkbench]].
 +
 +
|-
 +
|style="background-color: #D8FAFA;" colspan="2"|
 +
<h2>Web-enabled Version</h2>
 +
[[GeWorkbench-web/Overview|'''geWorkbench-web''']] provides installation-free access to the geWorkbench plug-ins through a pure browser interface. You can create and account and access the application at: http://geworkbench.c2b2.columbia.edu/geworkbench/.
 
|}
 
|}

Latest revision as of 16:47, 2 March 2022


Geworkbench banner.png

Overview

geWorkbench (genomics Workbench) is a Java-based open-source platform for integrated genomics. Using a component architecture it allows individually developed plug-ins to be configured into complex bioinformatic applications. At present there are more than 70 available plug-ins supporting the visualization and analysis of gene expression and sequence data. Example use cases include: [show details]

Quick Start

Please see the Quick Start guide to geWorkbench to see how to get started using geWorkbench right away.

Current Release

The latest production version of geWorkbench (v2.6.0.3) was released on December 21, 2016.

Web-enabled Version

geWorkbench-web provides installation-free access to the geWorkbench plug-ins through a pure browser interface. You can create and account and access the application at: http://geworkbench.c2b2.columbia.edu/geworkbench/.