Difference between revisions of "User:Daly"

Line 3: Line 3:
 
==Getting Started==
 
==Getting Started==
 
* Starting the application
 
* Starting the application
* Gui elements
+
* GUI elements
 
** Panels
 
** Panels
 
** Naviagation
 
** Naviagation

Revision as of 15:37, 3 February 2006

Tutorials

The following { insert description)

Getting Started

  • Starting the application
  • GUI elements
    • Panels
    • Naviagation

Loading Data

  • Data formats

Working with Marker and Phenotype Panels

  • Creating panels
  • Visualizing

Visualize Gene Expression

Filter and Normalize Data

Clustering Gene Expression Data

Differential Expression

  • T Test
  • Multi Test
  • Volcano Plot

Regulatory Network

  • Reverse Engineering
  • Cytoscape

Intergrated Annotation Information

Enrichment Analysis

  • Go Term
    • Go Miner

Sequence Analysis

  • Sequence Retrevial
  • Sequence Homology Analysis
    • Blast
    • Other

Pattern Discovery

  • Position histogram

Promoter Analysis