File list
This special page shows all uploaded files.
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Date | Name | Thumbnail | Size | User | Description | Versions |
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15:06, 12 December 2008 | ARACNE2-java.zip (file) | 17.45 MB | Manju | ARACNE2 Java version | 1 | |
13:46, 29 December 2009 | GeWorkBench User Guide.pdf (file) | 6.42 MB | Smith | 5 | ||
14:16, 5 September 2006 | Webmatrix2.zip (file) | 5.51 MB | Smith | 1 | ||
15:17, 11 March 2015 | Bcell-100 log2.zip (file) | 5.5 MB | Smith | This is the BCell-100 data, normalized with the threshold normalizer with a minimum value of 1.0, and then log2 transformed. | 1 | |
13:38, 27 July 2009 | Bcell-100.zip (file) | 5.13 MB | Smith | Corrected label on one group of arrays to match the rest of their group. | 2 | |
16:47, 3 July 2008 | GeWorkBench1.0 UserGuide V1.5.1.pdf (file) | 4.86 MB | Smith | 1 | ||
20:28, 23 October 2008 | GeWorkBench1.6 UserGuide.pdf (file) | 4.84 MB | Smith | 1 | ||
17:31, 11 January 2008 | GeWorkBench1.0 UserGuide V1.4.pdf (file) | 4.32 MB | Smith | Merges in the previously separate material on grid services, querying caArray, and use of caScript. | 1 | |
15:43, 19 May 2006 | Data.zip (file) | 4.3 MB | Smith | Various useful data files for testing and tutorials. | 2 | |
14:21, 17 July 2009 | Y5 600 Bst.txt (file) | 3.06 MB | Smith | MatrixReduce tutorial data file. | 1 | |
17:44, 14 August 2006 | Tutorial data.zip (file) | 2.53 MB | Smith | 2 | ||
14:52, 28 September 2006 | GeWorkbench1.0 UserGuide.pdf (file) | 1.87 MB | Floratos | 1 | ||
14:44, 18 March 2015 | HC web example dendrogram full.png (file) | Error creating thumbnail: File with dimensions greater than 12.5 MP |
1.43 MB | Smith | 1 | |
16:02, 13 October 2006 | GeWorkbench-HandsOnTraining year1.zip (file) | 1.31 MB | Smith | These PowerPoint training slides cover the functionality developed under the caBIG Year 1 SOW. They also include introductory material on basic use of geWorkbench. | 1 | |
16:57, 21 May 2007 | GeWorkbench 1.0 User Manual Supplement 1.pdf (file) | 1.19 MB | Floratos | 1 | ||
15:52, 22 January 2015 | GeWorkbench 2.6.0 Installation MacOSX README FIRST.pdf (file) | 728 KB | Smith | Very important instructions for installing and running geWorkbench 2.6.0 on MacOSX. | 1 | |
17:09, 23 January 2006 | Magnet CVS Structure.jpg (file) | 616 KB | Keshav | 1 | ||
15:16, 22 September 2016 | CNKB Cytoscape 0.7 t-test.png (file) | 480 KB | Smith | 1 | ||
14:21, 22 September 2016 | CNKB Cytoscape 0.7 concentric.png (file) | 456 KB | Smith | 1 | ||
14:25, 22 September 2016 | CNKB Cytoscape 0.7 cose.png (file) | 431 KB | Smith | 1 | ||
14:51, 24 May 2011 | GeWorkbench 2.2.0 CNKB Cytoscape.png (file) | 423 KB | Smith | 2 | ||
14:55, 20 November 2012 | Mra grid test.zip (file) | 405 KB | Smith | Data for testing MARINa. | 1 | |
17:34, 27 January 2011 | Cytoscape edges selected.png (file) | 396 KB | Smith | 1 | ||
14:54, 8 February 2011 | CNKB Cytoscape Results type shapes v2.2.png (file) | 365 KB | Smith | 2 | ||
15:18, 8 February 2011 | Cytoscape t-test display detail BHLHE40 v2.2.png (file) | 341 KB | Smith | 1 | ||
16:49, 25 October 2011 | Microarrays.zip (file) | 328 KB | Smith | Contains updated code for Tabular Microarray Viewer, compatible with geWorkbench 2.2.2. Adds export button to the viewer. | 1 | |
17:24, 29 July 2009 | T SOM result.png (file) | 326 KB | Smith | 1 | ||
17:36, 27 January 2011 | Cytoscape nodes selected.png (file) | 317 KB | Smith | 1 | ||
17:12, 6 May 2009 | Rmaerror.png (file) | 312 KB | Rfriedman | 1 | ||
15:08, 19 March 2012 | GeWorkbench 2.3.0 Main Cytoscape with frame.png (file) | 293 KB | Smith | 3 | ||
19:06, 9 February 2015 | LINCS fMoA Network Zoom.png (file) | 289 KB | Smith | 3 | ||
16:21, 31 January 2011 | Cytoscape display controls.png (file) | 283 KB | Smith | 1 | ||
13:54, 23 July 2012 | GeWorkbench Main GUI.png (file) | 281 KB | Smith | 1 | ||
15:08, 19 March 2012 | GeWorkbench 2.3.0 Main Cytoscape no frame.png (file) | 280 KB | Smith | 2 | ||
16:57, 16 October 2013 | GeWorkbench Main Cytoscape no frame.png (file) | 280 KB | Smith | 1 | ||
20:42, 14 July 2013 | ARACNe with t-test home gallery.PNG (file) | 278 KB | Floratos | Regulatory network reconstructed using the ARACNe algorithm. Nodes represent genes and edges represent ARACNe-predicted interactions between transcription factors and their putative targets. The results of a prior differential expression analysis have bee | 1 | |
17:25, 27 January 2011 | Cytoscape select edges.png (file) | 274 KB | Smith | 1 | ||
17:17, 27 January 2011 | CNKB Network in Cytoscape.png (file) | 264 KB | Smith | 1 | ||
18:20, 3 February 2011 | Cytoscape t-test display v2.2.png (file) | 256 KB | Smith | 1 | ||
16:27, 13 January 2014 | KMeans Show Selected.png (file) | 249 KB | Smith | 1 | ||
16:56, 6 June 2006 | T SOM display.png (file) | 246 KB | Smith | 2 | ||
19:10, 9 February 2015 | LINCS fMoA Network Select Nodes.png (file) | 245 KB | Smith | 2 | ||
15:14, 8 February 2011 | Cytoscape t-test display detail v2.2.png (file) | 243 KB | Smith | 2 | ||
17:13, 25 October 2011 | Selectors.zip (file) | 241 KB | Smith | 1 | ||
16:06, 11 June 2010 | GeWB GUI Cytoscape.png (file) | 239 KB | Smith | 1 | ||
14:58, 8 February 2011 | CNKB Result Cytoscape 3types v2.2.png (file) | 239 KB | Smith | 3 | ||
16:53, 6 May 2009 | Rmaerrormessage.doc (file) | 239 KB | Rfriedman | Error message on RMA | 1 | |
16:57, 17 March 2015 | CNKB web cytoscape.png (file) | 238 KB | Smith | 1 | ||
13:58, 31 January 2011 | Cytoscape Layout.png (file) | 226 KB | Smith | 1 | ||
11:05, 16 July 2013 | MarkUs home gallery.PNG (file) | 224 KB | Floratos | Results of running the MarkUs structure-based functional annotation pipeline on a protein with an available structure. | 1 |
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