Difference between revisions of "GSEA"

(→‎Setting up a GSEA run)
(→‎Setting up a GSEA run)
Line 8: Line 8:
 
=Setting up a GSEA run=
 
=Setting up a GSEA run=
  
−
In the Markers component, two sets of arryas must be activated - no more, and no less.  They do not need to be marked "Case" or "Control", this will have no effect.
+
In the Arrays component, two sets of arryas must be activated - no more, and no less.  They do not need to be marked "Case" or "Control", this will have no effect.

Revision as of 12:24, 14 January 2014

Home | Quick Start | Basics | Menu Bar | Preferences | Component Configuration Manager | Workspace | Information Panel | Local Data Files | File Formats | caArray | Array Sets | Marker Sets | Microarray Dataset Viewers | Filtering | Normalization | Tutorial Data | geWorkbench-web Tutorials

Analysis Framework | ANOVA | ARACNe | BLAST | Cellular Networks KnowledgeBase | CeRNA/Hermes Query | Classification (KNN, WV) | Color Mosaic | Consensus Clustering | Cytoscape | Cupid | DeMAND | Expression Value Distribution | Fold-Change | Gene Ontology Term Analysis | Gene Ontology Viewer | GenomeSpace | genSpace | Grid Services | GSEA | Hierarchical Clustering | IDEA | Jmol | K-Means Clustering | LINCS Query | Marker Annotations | MarkUs | Master Regulator Analysis | (MRA-FET Method) | (MRA-MARINa Method) | MatrixREDUCE | MINDy | Pattern Discovery | PCA | Promoter Analysis | Pudge | SAM | Sequence Retriever | SkyBase | SkyLine | SOM | SVM | T-Test | Viper Analysis | Volcano Plot


Overview

Coming soon!

Setting up a GSEA run

In the Arrays component, two sets of arryas must be activated - no more, and no less. They do not need to be marked "Case" or "Control", this will have no effect.

Retrieved from "http://wiki.c2b2.columbia.edu/workbench/index.php?title=GSEA&oldid=11895"