geWorkbench

Revision as of 15:09, 27 February 2006

Home \| Quick Start \| Basics \| Menu Bar \| Preferences \| Component Configuration Manager \| Workspace \| Information Panel \| Local Data Files \| File Formats \| caArray \| Array Sets \| Marker Sets \| Microarray Dataset Viewers \| Filtering \| Normalization \| Tutorial Data \| geWorkbench-web Tutorials	Analysis Framework \| ANOVA \| ARACNe \| BLAST \| Cellular Networks KnowledgeBase \| CeRNA/Hermes Query \| Classification (KNN, WV) \| Color Mosaic \| Consensus Clustering \| Cytoscape \| Cupid \| DeMAND \| Expression Value Distribution \| Fold-Change \| Gene Ontology Term Analysis \| Gene Ontology Viewer \| GenomeSpace \| genSpace \| Grid Services \| GSEA \| Hierarchical Clustering \| IDEA \| Jmol \| K-Means Clustering \| LINCS Query \| Marker Annotations \| MarkUs \| Master Regulator Analysis \| (MRA-FET Method) \| (MRA-MARINa Method) \| MatrixREDUCE \| MINDy \| Pattern Discovery \| PCA \| Promoter Analysis \| Pudge \| SAM \| Sequence Retriever \| SkyBase \| SkyLine \| SOM \| SVM \| T-Test \| Viper Analysis \| Volcano Plot

Versions available:

Downloads are available for current versions of Windows, Linux and Macintosh OS-X. Our primary development and testing platform is Windows XP.

Requirements:

Java:

geWorkbench requires that a version of the Sun Java Runtime Environment 5.0 or higher be installed on your computer. (This is also known as JRE version 1.5). We supply downloads of geWorkbench both with and without a bundled JRE. If you wish to install the JRE separately, it is available at J2SE 5.0.

Memory:

Testing of geWorkbench is done on machines with 1 GB of memory. 512 MB should be adequate for most geWorkbench modules. Working with large datasets (100s of arrays) may require additional memory.

Installation:

See the Download menu at left to obtain geWorkbench. The self-installing file includes all currently available geWorkbench modules as well as several example data files. The download package is created using InstallAnywhere from ZeroG Software.

geWorkbench

Difference between revisions of "Tutorial - Getting Started"

Revision as of 15:09, 27 February 2006

Contents

Versions available:

Requirements:

Java:

Memory:

Installation:

Search

Personal tools

Tools

Revision as of 15:04, 27 February 2006 (view source) Smith (talk \| contribs) m (Tutorial getting started moved to Tutorial: Getting Started) ← Older edit	Revision as of 15:09, 27 February 2006 (view source) Smith (talk \| contribs) m (Tutorial: Getting Started moved to Tutorial - Getting Started) Newer edit →
(No difference)